PPDB

 The Plant Proteome Database

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AT5G43460.1   HR-like lesion-inducing protein-like protein
Lab Annot. HR-like lesion-inducing protein-related
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G43460.2 11Arabidopsis thaliana8E-1081541001000 (0)S
AT1G04340.1 11Arabidopsis thaliana4E-8715983881 (1)S
AT4G14420.1 11Arabidopsis thaliana5E-43157526619 (19)S
Os04g10240.1 7Oryza sativa3E-51157527110 (10)S
Os03g05520.1 7Oryza sativa3E-47156547323 (23)S
Os10g30860.1 7Oryza sativa2E-40128497222 (22)S
GRMZM2G157354_P03 3.21Zea mays2E-4715751692 (2)S
Zm00001eb419550_P002 agpv5Zea mays2E-4715751690 (0)S
v1_GRMZM2G157354_P01 4a53Zea mays2E-4615751693 (3)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DoxX(1) HR_lesion(1) SURF4(1)
TargetP: Secreted (Class 3 C0.004; M0.172; S0.771; _0.044)
Predotar:
Subcel. Location:
TM-HMM prediction: 3 TMs
Aramemnon: 3 TMs
TAT position:
Length 154 aa (-cTP 124)
Molecular Weight 16.90 kDA(-cTP )
PI 10.05(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1423Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1425Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 2)
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
1432Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1442Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 1)
1448Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 1)
1450Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2250Detail       seedlings [A. thaliana] total tissue atg5
2253Detail       seedlings [A. thaliana] total tissue atg5

* For details about the exprimental sources click here.

Published Proteomics Data

 16618929(ER-LOPIT-callus)
22430844(Golgi-cell-culture)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help