PPDB

The Plant Proteome Database

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AT5G43450.1   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

Lab Annot. 2-oxoglutarate-dependent dioxygenase
Mapman: 17.5.1 hormone metabolism.ethylene.synthesis-degradation
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G43440.1 11Arabidopsis thaliana036576870 (0)_
AT5G43450.2 11Arabidopsis thaliana028797970 (0)_
AT5G59540.1 11Arabidopsis thaliana1E-17136663770 (0)_
Os03g48430.1 7Oryza sativa5E-9936640612 (2)_
Os04g10350.1 7Oryza sativa5E-9435644600 (0)_
Os08g30210.1 7Oryza sativa4E-8936142570 (0)_
GRMZM2G119116_P02 3.21Zea mays1E-10836644610 (0)_
v1_GRMZM2G119116_P02 4a53Zea mays1E-10836644610 (0)_
Zm00001eb419580_P001 agpv5Zea mays1E-10836644610 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: 2OG-FeII_Oxy(2) DIOX_N(1)
TargetP: Cytoplasm (Class 2 C0.185; M0.060; S0.042; _0.824)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 362 aa (-cTP 279)
Molecular Weight 40.88 kDA(-cTP )
PI 4.96(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help