PPDB

PPDB	The Plant Proteome Database

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AT5G43420.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G04360.1 11 Arabidopsis thaliana 7E-139 394 59 72 0 (0) _
AT4G17905.1 11 Arabidopsis thaliana 4E-29 228 32 50 0 (0) _
AT4G17905.2 11 Arabidopsis thaliana 1E-28 228 32 50 0 (0) S
Os02g57460.1 7 Oryza sativa 3E-49 303 33 54 0 (0) _
Os03g05560.1 7 Oryza sativa 8E-36 301 32 49 0 (0) C
Os03g05570.1 7 Oryza sativa 1E-28 176 35 49 0 (0) _
Zm00001eb191210_P001 agpv5 Zea mays 8E-38 161 40 58 0 (0) C
GRMZM2G146228_P01 3.21 Zea mays 8E-38 161 40 58 0 (0) C
v1_GRMZM2G146228_P01 4a53 Zea mays 1E-37 167 39 58 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(1) PHD(1) Prok-RING_1(2) Prok-RING_4(1) RINGv(1) zf-ANAPC11(1) zf-C3HC4(
TargetP:	Mitochondria (Class 5 C0.045; M0.495; S0.076; _0.479)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	375 aa (-cTP 349)
Molecular Weight	42.32 kDA(-cTP )
PI	9.03(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data