PPDB

PPDB	The Plant Proteome Database

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AT5G43400.1 plant/protein

Lab Annot.

unknown protein
Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G43390.1 11 Arabidopsis thaliana 0 655 82 89 0 (0) C
AT5G13210.1 11 Arabidopsis thaliana 0 681 55 69 0 (0) C
AT3G24780.1 11 Arabidopsis thaliana 0 613 56 70 0 (0) C
Os02g08330.1 7 Oryza sativa 0 645 52 66 0 (0) M
Os06g44240.1 7 Oryza sativa 0 621 51 65 0 (0) M
Os09g32360.1 7 Oryza sativa 2E-168 606 44 60 0 (0) _
Zm00001eb206670_P001 agpv5 Zea mays 0 620 52 66 0 (0) _
v1_GRMZM2G143457_P01 4a53 Zea mays 0 620 52 66 0 (0) _
GRMZM2G143457_P01 3.21 Zea mays 0 620 52 66 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CRA(1) DUF2805(2) DUF2828(1) VWA_2(1)
TargetP:	Chloroplast (Class 3 C0.767; M0.046; S0.081; _0.308)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	655 aa (-cTP 642)
Molecular Weight	74.64 kDA(-cTP 73.39)
PI	5.99(-cTP 6.00)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data