PPDB

The Plant Proteome Database

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AT5G43300.1   PLC-like phosphodiesterases superfamily protein

Lab Annot.
Mapman: 11.9.3.3 lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G43300.2 11Arabidopsis thaliana02921001000 (0)_
AT3G02040.1 11Arabidopsis thaliana1E-13333955730 (0)C
AT5G41080.2 11Arabidopsis thaliana4E-12731755750 (0)C
Os02g31030.2 7Oryza sativa4E-13530560770 (0)S
Os02g31030.1 7Oryza sativa6E-13530560770 (0)S
Os08g42390.1 7Oryza sativa7E-11129454730 (0)C
GRMZM5G829946_P04 3.21Zea mays4E-12435151700 (0)_
Zm00001eb085150_P004 agpv5Zea mays4E-12435151700 (0)_
v1_GRMZM2G015973_P02 4a53Zea mays4E-12435151700 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: GDPD(1)
TargetP: Cytoplasm (Class 3 C0.139; M0.036; S0.285; _0.699)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 370 aa (-cTP 306)
Molecular Weight 42.29 kDA(-cTP )
PI 5.12(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2030Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2245Detail       seedlings [A. thaliana] total tissue wild-type
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help