PPDB

The Plant Proteome Database

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AT5G43070.1   WPP domain protein 1

Lab Annot. WPP1 (WPP domain protein 1)
Mapman: 31 cell
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G47200.1 11Arabidopsis thaliana9E-48147587222 (18)_
AT5G27940.1 11Arabidopsis thaliana3E-2614145630 (0)_
AT3G63130.1 11Arabidopsis thaliana4E-1390386230 (24)C
Os03g11060.1 7Oryza sativa9E-1895447023 (23)_
Os05g46560.1 7Oryza sativa2E-1599416246 (46)_
Os05g46560.2 7Oryza sativa2E-1599416246 (46)_
GRMZM2G163083_P01 3.21Zea mays3E-209643680 (0)C
v1_GRMZM2G411084_P01 4a53Zea mays1E-1994467317 (17)_
GRMZM2G411084_P01 3.21Zea mays1E-1994467320 (20)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: KIX_2(2) TFIIS_M(1) VAPB_antitox(2) WPP(1)
TargetP: Chloroplast (Class 4 C0.798; M0.020; S0.042; _0.572)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 155 aa (-cTP 78)
Molecular Weight 16.63 kDA(-cTP 8.14)
PI 4.46(-cTP 4.33)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
94Detail       root [B. rapa] plastid stroma 
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)

* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)
19546170(mature pollen grains)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help