PPDB

PPDB	The Plant Proteome Database

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AT5G42940.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G42940.2 11 Arabidopsis thaliana 0 691 100 100 0 (0) _
AT1G45180.1 11 Arabidopsis thaliana 0 700 54 66 0 (0) _
AT1G45180.3 11 Arabidopsis thaliana 0 700 54 66 0 (0) _
Os04g55510.1 7 Oryza sativa 4E-57 755 30 45 0 (0) _
Os04g10680.4 7 Oryza sativa 5E-43 203 47 63 0 (0) _
Os04g10680.3 7 Oryza sativa 5E-43 203 47 63 0 (0) _
Zm00001eb432070_P003 agpv5 Zea mays 3E-56 749 29 45 0 (0) _
Zm00001eb432070_P001 agpv5 Zea mays 3E-56 749 29 45 0 (0) _
Zm00001eb068540_P002 agpv5 Zea mays 3E-52 179 51 69 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(1) PHD(1) Prok-RING_4(1) RINGv(1) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC4_2(1
TargetP:	Cytoplasm (Class 3 C0.191; M0.074; S0.126; _0.700)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	691 aa (-cTP 596)
Molecular Weight	75.28 kDA(-cTP )
PI	6.46(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data