PPDB

The Plant Proteome Database

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AT5G42860.1   late embryogenesis abundant protein%2C group 2

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G45688.1 11Arabidopsis thaliana4E-16134474810 (0)C
AT1G45688.2 11Arabidopsis thaliana3E-11724472790 (0)C
AT4G35170.1 11Arabidopsis thaliana1E-5132233510 (0)C
Os04g59330.1 7Oryza sativa2E-10333354672 (2)C
Os04g35130.1 7Oryza sativa7E-6835542560 (0)_
Os06g06780.1 7Oryza sativa2E-6133036536 (6)C
Zm00001eb076240_P001 agpv5Zea mays6E-8534148610 (0)C
v1_GRMZM2G081957_P02 4a53Zea mays6E-8534148614 (4)C
GRMZM2G081957_P02 3.21Zea mays6E-8534148616 (6)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: LEA_2(2) MAP65_ASE1(1)
TargetP: Chloroplast (Class 1 C0.953; M0.055; S0.011; _0.067)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 320 aa (-cTP 248)
Molecular Weight 35.02 kDA(-cTP 27.28)
PI 10.05(-cTP 10.01)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
20733066(phosphoproteome-ABA-leaf)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help