PPDB

 The Plant Proteome Database

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AT5G42690.1   transcription factor%2C putative (Protein of unknown function%2C DUF547)
Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G42690.4 11Arabidopsis thaliana054099990 (0)C
AT5G42690.2 11Arabidopsis thaliana054099990 (0)C
AT5G42690.5 11Arabidopsis thaliana051099990 (0)_
Os09g28850.2 7Oryza sativa8E-13357244600 (0)_
Os09g28850.3 7Oryza sativa8E-13357244600 (0)_
Os09g28850.1 7Oryza sativa2E-13257244600 (0)M
Zm00001eb101010_P005 agpv5Zea mays8E-12060040570 (0)_
Zm00001eb101010_P001 agpv5Zea mays8E-12060040570 (0)_
Zm00001eb101010_P003 agpv5Zea mays8E-12060040570 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF1732(2) DUF547(1) Fez1(2) Lzipper-MIP1(2)
TargetP: Chloroplast (Class 3 C0.838; M0.051; S0.044; _0.248)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 539 aa (-cTP 521)
Molecular Weight 60.81 kDA(-cTP 58.95)
PI 9.29(-cTP 9.26)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help