PPDB

PPDB	The Plant Proteome Database

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AT5G42630.2 Homeodomain-like superfamily protein

Lab Annot.

Mapman: 27.3.20 RNA.regulation of transcription.G2-like transcription factor family, GARP; 27.3.25 RNA.regulation of transcription.MYB domain transcription factor family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G42630.1 11 Arabidopsis thaliana 4E-155 209 100 100 0 (0) _
AT1G32240.2 11 Arabidopsis thaliana 4E-37 89 71 83 0 (0) C
AT4G17695.1 11 Arabidopsis thaliana 6E-37 77 77 89 0 (0) _
Os03g55760.1 7 Oryza sativa 5E-40 201 44 57 0 (0) M
Os09g23200.1 7 Oryza sativa 3E-35 75 82 89 0 (0) _
Os02g46940.1 7 Oryza sativa 4E-35 97 64 73 0 (0) _
GRMZM2G034563_P01 3.21 Zea mays 5E-38 93 74 79 0 (0) _
v1_GRMZM2G034563_P01 4a53 Zea mays 5E-38 93 74 79 0 (0) _
Zm00001eb214030_P001 agpv5 Zea mays 1E-37 185 51 59 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Caskin1-CID(2) CPSF100_C(1) Myb_DNA-binding(1)
TargetP:	Cytoplasm (Class 4 C0.228; M0.158; S0.012; _0.446)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	223 aa (-cTP 180)
Molecular Weight	25.19 kDA(-cTP )
PI	9.27(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)

Comparative Proteomics Data