PPDB

PPDB	The Plant Proteome Database

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AT5G42540.1 exoribonuclease 2

Lab Annot.

exoribonuclease 2
Mapman: 27.1.19 RNA.processing.ribonucleases

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G42540.2 11 Arabidopsis thaliana 0 1023 98 98 0 (0) _
AT1G75660.1 11 Arabidopsis thaliana 0 956 60 74 7 (6) S
AT1G54490.1 11 Arabidopsis thaliana 0 433 63 79 2 (1) _
Os01g65220.1 7 Oryza sativa 0 937 60 74 0 (0) S
Os03g58060.1 7 Oryza sativa 0 866 48 63 0 (0) _
Os03g58060.2 7 Oryza sativa 0 783 50 65 0 (0) _
Zm00001eb127930_P003 agpv5 Zea mays 0 875 63 77 0 (0) _
v1_GRMZM2G121404_P02 4a53 Zea mays 0 875 63 77 0 (0) _
GRMZM2G121404_P02 3.21 Zea mays 0 875 63 77 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	XRN_M(1) XRN_N(2) zf-CCHC(1)
TargetP:	Cytoplasm (Class 5 C0.012; M0.468; S0.339; _0.541)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1012 aa (-cTP 912)
Molecular Weight	116.38 kDA(-cTP )
PI	9.04(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data