PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G42500.1   Disease resistance-responsive (dirigent-like protein) family protein

Lab Annot.
Mapman: 20.1.7 stress.biotic.PR-proteins
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G42510.1 11Arabidopsis thaliana6E-10518586912 (2)S
AT1G22900.1 11Arabidopsis thaliana6E-8917569800 (0)S
AT1G65870.1 11Arabidopsis thaliana4E-73169627532 (1)S
Os11g07770.1 7Oryza sativa1E-5418846620 (0)S
Os11g07830.1 7Oryza sativa6E-5114555690 (0)S
Os11g07740.1 7Oryza sativa9E-5117945630 (0)S
GRMZM2G132273_P01 3.21Zea mays5E-5314955700 (0)S
v1_GRMZM2G132273_P01 4a53Zea mays5E-5314955700 (0)S
Zm00001eb408140_P001 agpv5Zea mays5E-5314955700 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Dirigent(1)
TargetP: Secreted (Class 1 C0.013; M0.050; S0.943; _0.048)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 185 aa (-cTP 122)
Molecular Weight 20.44 kDA(-cTP )
PI 8.95(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

WallDB-E.Jamet(cell wall reference proteome)
21109274(cellwall-glycoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help