PPDB

PPDB	The Plant Proteome Database

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AT5G42450.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G42450.2 11 Arabidopsis thaliana 0 391 85 89 0 (0) M
AT2G13600.1 11 Arabidopsis thaliana 9E-101 468 35 60 0 (0) _
AT2G29760.1 11 Arabidopsis thaliana 2E-95 469 34 60 1 (0) C
Os01g62220.1 7 Oryza sativa 3E-180 461 53 73 0 (0) M
Os04g35610.1 7 Oryza sativa 7E-95 501 34 56 0 (0) M
Os03g56400.1 7 Oryza sativa 4E-94 460 35 59 0 (0) _
GRMZM2G006763_P01 3.21 Zea mays 0 451 55 74 0 (0) _
Zm00001eb148530_P001 agpv5 Zea mays 0 451 55 74 0 (0) _
v1_GRMZM2G006763_P01 4a53 Zea mays 0 451 55 74 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	PPR(9) PPR_1(6) PPR_2(7) PPR_3(6) PPR_long(3) TPR_1(4) TPR_10(3) TPR_12(3) TPR_1
TargetP:	Mitochondria (Class 2 C0.018; M0.721; S0.068; _0.119)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	517 aa (-cTP 498)
Molecular Weight	58.30 kDA(-cTP )
PI	7.92(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data