PPDB

 The Plant Proteome Database

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AT5G42430.1   F-box and associated interaction domains-containing protein
Lab Annot. F-box and associated interaction domains-containing protein
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G30920.1 11Arabidopsis thaliana3E-12740254670 (0)_
AT3G57590.1 11Arabidopsis thaliana3E-11037850630 (0)C
AT1G33020.1 11Arabidopsis thaliana1E-10739351600 (0)_
Os12g06740.2 7Oryza sativa2E-1139925390 (0)M
Os12g06740.1 7Oryza sativa2E-1139925390 (0)M
Os09g27660.3 7Oryza sativa2E-1026925430 (0)M
GRMZM2G156506_P01 3.21Zea mays7E-1032123400 (0)C
v1_GRMZM2G156506_P01 4a53Zea mays7E-1032123400 (0)C
Zm00001eb407470_P001 agpv5Zea mays7E-1032123400 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: CC2D2AN-C2(1) F-box(1) F-box-like(1) FBA_1(2) FBA_3(2)
TargetP: Cytoplasm (Class 3 C0.376; M0.033; S0.041; _0.832)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 395 aa (-cTP 307)
Molecular Weight 45.73 kDA(-cTP )
PI 8.43(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help