PPDB

The Plant Proteome Database

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AT5G42400.1   SET domain protein 25

Lab Annot. SET domain protein 25
Mapman: 27.3.69 RNA.regulation of transcription.SET-domain transcriptional regulator family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G42400.6 11Arabidopsis thaliana013881001000 (0)_
AT5G42400.4 11Arabidopsis thaliana013881001000 (0)_
AT5G42400.7 11Arabidopsis thaliana013881001000 (0)_
Os12g41900.1 7Oryza sativa2E-9324065780 (0)_
Os09g04890.1 7Oryza sativa6E-3814250710 (0)_
Os09g38440.1 7Oryza sativa8E-3215843630 (0)M
Zm00001eb406010_P001 agpv5Zea mays1E-10033155710 (0)_
Zm00001eb406010_P004 agpv5Zea mays1E-10033155710 (0)_
Zm00001eb406010_P002 agpv5Zea mays1E-10033155710 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: GYF(2) GYF_2(2) SET(1)
TargetP: Cytoplasm (Class 5 C0.402; M0.126; S0.049; _0.515)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1388 aa (-cTP 1343)
Molecular Weight 154.27 kDA(-cTP )
PI 8.60(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19888209(80S polysomal fraction)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help