PPDB

PPDB	The Plant Proteome Database

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AT5G42340.1 Plant U-Box 15

Lab Annot.

ubiquitin-protein ligase
Mapman: 20.1 stress.biotic

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G46510.1 11 Arabidopsis thaliana 7E-168 619 42 63 9 (2) _
AT3G54850.1 11 Arabidopsis thaliana 9E-146 631 40 61 0 (0) _
AT2G28830.1 11 Arabidopsis thaliana 1E-132 547 40 63 4 (4) S
Os08g37570.1 7 Oryza sativa 0 619 53 72 0 (0) _
Os06g51130.1 7 Oryza sativa 0 610 51 71 0 (0) _
Os06g01304.2 7 Oryza sativa 1E-150 598 42 61 0 (0) C
v1_GRMZM2G389462_P01 4a53 Zea mays 0 612 53 73 3 (2) _
Zm00001eb228550_P001 agpv5 Zea mays 0 612 53 73 0 (0) _
GRMZM2G389462_P01 3.21 Zea mays 0 612 53 73 3 (3) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Arm(5) Arm_2(2) Cnd1(4) HEAT(2) HEAT_2(3) KAP(1) RTTN_N(1) SSrecog(1) U-box(1) z
TargetP:	Cytoplasm (Class 1 C0.045; M0.107; S0.110; _0.961)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	660 aa (-cTP 642)
Molecular Weight	73.89 kDA(-cTP )
PI	5.00(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
451	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)

Comparative Proteomics Data