PPDB

The Plant Proteome Database

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AT5G42280.1   Cysteine/Histidine-rich C1 domain family protein

Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G42280.2 11Arabidopsis thaliana0531991000 (0)S
AT1G55390.1 11Arabidopsis thaliana067664740 (0)C
AT1G55380.1 11Arabidopsis thaliana065565750 (0)C
GRMZM2G400444_P01 3.21Zea mays4E-0817828390 (0)M
v1_GRMZM2G400444_P01 4a53Zea mays4E-0817828390 (0)M
Zm00001eb317000_P001 agpv5Zea mays4E-0817828390 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: C1_1(8) C1_2(9) PHD(7)
TargetP: Chloroplast (Class 3 C0.718; M0.133; S0.028; _0.139)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 694 aa (-cTP 627)
Molecular Weight 80.04 kDA(-cTP 72.59)
PI 7.12(-cTP 6.63)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help