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AT5G42070.1
hypothetical protein
|
| Lab Annot. |
unknown protein
Mapman: 35.2 not assigned.unknown |
| Curated Location |
plastid (Pubmed: 23198870 )
TAIR curated location: thylakoid membrane (sensu Viridiplantae)15322131 |
| Species |
Arabidopsis thaliana
Source:
TAIR Arabidopsis (v.11) |
| Links |
TAIR PeptideAtlas POGS SUBA Uniprot PTM
Get sequence
|
Related Genes
|
| Acc | ver | Species | Evalue | Matchlen | %Iden | %Similar | #spots | TargetP |
| Os01g13390.1 | 7 | Oryza sativa | 3E-38 | 72 | 79 | 86 | 29 (29) | C |
#Spots: The number of publicly accessible spots are in parenthesis
|
| Prediction |
| PFAM: |
|
| TargetP: |
Chloroplast (Class 1 C0.988; M0.036; S0.015; _0.017) |
| Predotar: |
|
| Subcel. Location: |
Stroma |
| TM-HMM prediction: |
No |
| Aramemnon: |
|
| TAT position: |
|
| Length |
164 aa (-cTP 92) |
| Molecular Weight |
17.68 kDA(-cTP 9.79) |
| PI |
8.88(-cTP 9.19) |
|
|
Experimental Evidence
Expand
View Identified Peptides
View GeneModel
|
| Expr* | Spot | MW native | MW denatured | pI native | pI denatured | Type | Mowse | Ambiguity | Tissue | Sample from | Genotype |
| 107 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast thylakoid membrane | wild-type |
| 327 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast thylakoid membrane | wild-type |
| 1394 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (rep. 1) |
| 1395 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (rep. 1) |
| 1396 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | clpt1xclpt2 (rep. 2) |
| 1405 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 2. | wild-type |
| 1416 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 rep 1.2 | clpr2-1 |
| 1417 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | clpr4-1 (rep. 2) |
| 1427 | Detail | | | | | | | | [A. thaliana] | total leaf tissue 1.11 | wild-type |
| 1428 | Detail | | | | | | | | [A. thaliana] | total leaf tissue 1.11 | Prep1_Prep2_t1_t2 |
| 1431 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | wild-type (rep. 2) |
| 1432 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | wild-type (rep. 2) |
| 1531 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue - 40 uM CAP | wild-type (rep. 1) |
| 1596 | Detail | | | | | | | | [A. thaliana] | | |
| 1713 | Detail | | | | | | | | Rosettes [A. thaliana] | Thylakoids thylakoid membrane | k1k3 |
| 1765 | Detail | | | | | | | | leaf [A. thaliana] | Thylakoids thylakoid membrane | Col-0 |
| 1938 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast | Prep1_Prep2 |
| 1987 | Detail | | | | | | | | leaf [A. thaliana] | plastid | Prep1_Prep2 |
| 1988 | Detail | | | | | | | | leaf [A. thaliana] | plastid | Prep1_Prep2 |
| 2009 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type |
| 2010 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1-1xprep2-1 |
| 2011 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | opda1-2 |
| 2316 | Detail | | | | | | | | leaf [A. thaliana] | PG plastoglobule | |
* For details about the exprimental sources
click here.
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Published Proteomics Data
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15322131(Thylakoid-stripped)
18431481(chloroplast)
18436743(specific to leaves)
19525416(leaf (wt and clpr4-1 mutant))
19376835(leaf phosphoproteins)
20061580(chloroplast envelope (inner+outer))
19995723(chloroplast reference proteome)
21311031(chloroplasts)
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Comparative Proteomics Data
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