PPDB

The Plant Proteome Database

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AT5G42040.1   regulatory particle non-ATPase 12B

Lab Annot. regulatory particle non-ATPase 12B
Mapman: 29.5.11.20 protein.degradation.ubiquitin.proteasom
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G64520.1 11Arabidopsis thaliana3E-1192677077250 (143)_
Os07g25420.1 7Oryza sativa2E-101267617244 (44)_
Os07g25420.2 7Oryza sativa2E-6922257689 (9)_
GRMZM2G073077_P02 3.21Zea mays1E-96267597085 (40)_
Zm00001eb413880_P001 agpv5Zea mays1E-9626759700 (0)_
v1_GRMZM2G073077_P02 4a53Zea mays1E-96267597043 (43)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CSN8_PSD8_EIF3K(1) SAC3_GANP(1)
TargetP: Cytoplasm (Class 1 C0.013; M0.081; S0.061; _0.939)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 233 aa (-cTP 163)
Molecular Weight 26.73 kDA(-cTP )
PI 5.02(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

20516081(tagged-26S proteasome-affinity)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help