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PPDB	The Plant Proteome Database

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AT5G41940.1 Ypt/Rab-GAP domain of gyp1p superfamily protein

Lab Annot.

RabGAP/TBC domain-containing protein
Mapman: 30.5 signalling.G-proteins

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G53570.1 11 Arabidopsis thaliana 0 474 58 72 0 (0) C
AT5G53570.2 11 Arabidopsis thaliana 0 474 58 72 0 (0) M
AT3G49350.1 11 Arabidopsis thaliana 0 489 58 71 0 (0) C
Os09g35960.1 7 Oryza sativa 0 517 56 67 0 (0) C
Os08g43380.1 7 Oryza sativa 0 491 57 70 0 (0) C
Os10g37410.1 7 Oryza sativa 0 536 55 66 0 (0) M
v1_GRMZM2G155337_P02 4a53 Zea mays 0 501 60 71 0 (0) C
GRMZM2G155337_P02 3.21 Zea mays 0 501 60 71 0 (0) C
Zm00001eb103300_P001 agpv5 Zea mays 0 501 60 71 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF966(1) RabGAP-TBC(3)
TargetP:	Secreted (Class 5 C0.001; M0.288; S0.310; _0.260)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	549 aa (-cTP 484)
Molecular Weight	62.33 kDA(-cTP )
PI	5.39(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
528	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt2)

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
21173025(root proteome)
21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data