PPDB

PPDB	The Plant Proteome Database

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AT5G41770.1 crooked neck protein%2C putative / cell cycle protein

Lab Annot.

crooked neck protein, cell cycle protein
Mapman: 31.3 cell.cycle

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G45990.2 11 Arabidopsis thaliana 0 699 84 91 0 (0) _
AT5G45990.1 11 Arabidopsis thaliana 0 685 85 91 0 (0) _
AT3G13210.1 11 Arabidopsis thaliana 0 705 78 83 11 (11) _
Os05g22260.1 7 Oryza sativa 0 700 72 86 0 (0) _
Os05g22260.2 7 Oryza sativa 0 523 77 90 0 (0) _
Os06g33250.1 7 Oryza sativa 0 542 65 78 0 (0) C
Zm00001eb051990_P001 agpv5 Zea mays 0 714 72 85 0 (0) _
v1_GRMZM2G100448_P01 4a53 Zea mays 0 714 72 85 18 (18) _
GRMZM2G100448_P01 3.21 Zea mays 0 763 67 80 1 (1) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	HAT(14) RNase_H2_suC(1) Suf(7) TPR_12(2) TPR_14(10) TPR_16(4) TPR_17(4) TPR_19(4
TargetP:	Cytoplasm (Class 2 C0.107; M0.176; S0.048; _0.867)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	705 aa (-cTP 658)
Molecular Weight	84.53 kDA(-cTP )
PI	5.86(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
2290	Detail								[A. thaliana]		Clp C1 TRAP
2320	Detail								[A. thaliana]	Thylakoids plastoglobule

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data