PPDB

The Plant Proteome Database

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AT5G41770.1   crooked neck protein%2C putative / cell cycle protein

Lab Annot. crooked neck protein, cell cycle protein
Mapman: 31.3 cell.cycle
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G45990.2 11Arabidopsis thaliana069984910 (0)_
AT5G45990.1 11Arabidopsis thaliana068585910 (0)_
AT3G13210.1 11Arabidopsis thaliana0705788311 (11)_
Os05g22260.1 7Oryza sativa070072860 (0)_
Os05g22260.2 7Oryza sativa052377900 (0)_
Os06g33250.1 7Oryza sativa054265780 (0)C
Zm00001eb051990_P001 agpv5Zea mays071472850 (0)_
v1_GRMZM2G100448_P01 4a53Zea mays0714728518 (18)_
GRMZM2G100448_P01 3.21Zea mays076367801 (1)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: HAT(14) RNase_H2_suC(1) Suf(7) TPR_12(2) TPR_14(10) TPR_16(4) TPR_17(4) TPR_19(4
TargetP: Cytoplasm (Class 2 C0.107; M0.176; S0.048; _0.867)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 705 aa (-cTP 658)
Molecular Weight 84.53 kDA(-cTP )
PI 5.86(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
2290Detail        [A. thaliana] Clp C1 TRAP
2320Detail        [A. thaliana] Thylakoids plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help