PPDB

PPDB	The Plant Proteome Database

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AT5G41690.1 RNA-binding (RRM/RBD/RNP motifs) family protein

Lab Annot.

RNA-binding (RRM/RBD/RNP motifs) protein
Mapman: 27.1 RNA.processing

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G41690.3 11 Arabidopsis thaliana 0 567 100 100 0 (0) _
AT5G41690.2 11 Arabidopsis thaliana 0 567 100 100 0 (0) _
AT1G45100.1 11 Arabidopsis thaliana 6E-139 561 45 59 0 (0) _
Os04g42600.2 7 Oryza sativa 1E-18 444 19 41 14 (14) S
Os04g42600.1 7 Oryza sativa 1E-18 444 19 41 14 (14) S
Os06g38980.1 7 Oryza sativa 3E-18 446 20 39 0 (0) _
Zm00001eb426070_P001 agpv5 Zea mays 2E-18 443 19 41 0 (0) _
v1_GRMZM2G352129_P01 4a53 Zea mays 2E-18 443 20 41 30 (30) S
Zm00001eb078040_P001 agpv5 Zea mays 2E-18 443 20 41 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	BRAP2(4) Nup35_RRM_2(4) PHM7_cyt(6) RRM_1(4) RRM_5(4) RRM_occluded(4) RRM_Rrp7(4
TargetP:	Cytoplasm (Class 3 C0.138; M0.248; S0.065; _0.689)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	567 aa (-cTP 506)
Molecular Weight	65.29 kDA(-cTP )
PI	6.72(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data