PPDB

 The Plant Proteome Database

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AT5G41580.1   RING/U-box superfamily protein
Lab Annot.
Mapman: 27.3.50 RNA.regulation of transcription.General Transcription
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G08910.1 11Arabidopsis thaliana5E-14259844580 (0)_
AT5G60410.3 11Arabidopsis thaliana8E-0810429500 (0)_
AT5G60410.5 11Arabidopsis thaliana8E-0810429500 (0)_
Os06g06870.1 7Oryza sativa1E-11643641620 (0)C
Os03g50980.1 7Oryza sativa3E-0810427520 (0)_
Os05g03430.3 7Oryza sativa4E-0810324510 (0)_
Zm00001eb375680_P001 agpv5Zea mays3E-11243540620 (0)_
GRMZM2G075582_P01 3.21Zea mays3E-11243540620 (0)_
Zm00001eb375680_P002 agpv5Zea mays4E-11043940610 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: zf-4CXXC_R1(1) zf-MIZ(1) zf-Nse(2)
TargetP: Mitochondria (Class 4 C0.139; M0.574; S0.060; _0.244)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 760 aa (-cTP 740)
Molecular Weight 83.11 kDA(-cTP )
PI 7.61(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 22060019(phosphoproteome - N-starved seedlings)
20813957(SUMO proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help