PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G41540.1   Disease resistance protein (TIR-NBS-LRR class) family
Lab Annot. disease resistance protein (TIR-NBS-LRR class)
Mapman: 20.1.7 stress.biotic.PR-proteins
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G41550.1 11Arabidopsis thaliana0107563740 (0)M
AT5G41750.1 11Arabidopsis thaliana0103261751 (1)M
AT5G41750.2 11Arabidopsis thaliana0103261751 (1)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AAA(1) AAA_14(1) AAA_16(1) AAA_18(1) AAA_22(1) AAA_24(1) ABC_tran(1) ATPase_2(1)
TargetP: Mitochondria (Class 5 C0.112; M0.449; S0.039; _0.325)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1038 aa (-cTP 1034)
Molecular Weight 118.50 kDA(-cTP )
PI 8.80(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1432Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
2247Detail       seedlings [A. thaliana] total tissue atg5

* For details about the exprimental sources click here.

Published Proteomics Data

 19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help