PPDB

PPDB	The Plant Proteome Database

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AT5G41450.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G41430.1 11 Arabidopsis thaliana 6E-37 169 49 56 0 (0) S
AT5G41440.1 11 Arabidopsis thaliana 9E-20 91 46 61 0 (0) S
AT1G51930.1 11 Arabidopsis thaliana 3E-19 144 38 47 0 (0) S
Os03g27360.1 7 Oryza sativa 5E-12 81 37 51 0 (0) S
Os12g42540.1 7 Oryza sativa 6E-12 47 51 63 1 (1) _
Os07g06560.1 7 Oryza sativa 9E-12 77 37 53 0 (0) _
v1_GRMZM2G145382_P01 4a53 Zea mays 3E-13 50 48 64 0 (0) S
Zm00001eb134620_P001 agpv5 Zea mays 3E-13 50 48 64 0 (0) S
GRMZM2G145382_P01 3.21 Zea mays 3E-13 50 48 64 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(1) PHD(1) Prok-RING_1(2) RINGv(1) zf-ANAPC11(1) zf-C3H2C3(1) zf-C3HC4(1)
TargetP:	Secreted (Class 2 C0.009; M0.044; S0.941; _0.294)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	164 aa (-cTP 162)
Molecular Weight	19.14 kDA(-cTP )
PI	5.30(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data