PPDB

PPDB	The Plant Proteome Database

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AT5G41440.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G41450.1 11 Arabidopsis thaliana 3E-21 97 47 61 0 (0) S
AT5G41430.1 11 Arabidopsis thaliana 2E-17 86 48 67 0 (0) S
AT1G51930.1 11 Arabidopsis thaliana 3E-17 120 38 54 0 (0) S
Os02g46600.1 7 Oryza sativa 1E-10 50 44 66 0 (0) _
Os11g39640.1 7 Oryza sativa 2E-10 46 47 69 0 (0) _
Os11g02424.1 7 Oryza sativa 9E-10 123 26 48 0 (0) C
Zm00001eb313170_P001 agpv5 Zea mays 4E-10 50 42 64 0 (0) M
Zm00001eb371600_P001 agpv5 Zea mays 5E-10 50 42 64 0 (0) M
v1_GRMZM2G361902_P01 4a53 Zea mays 6E-10 84 33 48 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	OppC_N(1) PHD(1) RINGv(1) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3HC4_3(1)
TargetP:	Secreted (Class 1 C0.010; M0.018; S0.976; _0.070)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	124 aa (-cTP 58)
Molecular Weight	14.05 kDA(-cTP )
PI	5.50(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data