PPDB

PPDB	The Plant Proteome Database

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AT5G41400.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G63840.1 11 Arabidopsis thaliana 3E-75 181 63 75 0 (0) S
AT3G61460.1 11 Arabidopsis thaliana 2E-54 169 54 68 0 (0) S
AT4G11360.1 11 Arabidopsis thaliana 2E-32 170 35 54 0 (0) _
Os02g45710.1 7 Oryza sativa 3E-26 171 42 56 0 (0) S
Os04g49000.1 7 Oryza sativa 4E-25 106 46 56 0 (0) S
Os02g45780.1 7 Oryza sativa 3E-13 106 35 49 0 (0) S
GRMZM2G071277_P01 3.21 Zea mays 1E-26 170 44 53 0 (0) S
v1_GRMZM2G071277_P01 4a53 Zea mays 5E-26 170 44 53 0 (0) M
Zm00001eb187290_P001 agpv5 Zea mays 2E-25 188 39 51 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(1) Lipase3_N(1) Prok-RING_1(2) Prok-RING_4(1) Rad50_zn_hook(2) RINGv(1)
TargetP:	Secreted (Class 4 C0.002; M0.340; S0.689; _0.059)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	176 aa (-cTP 100)
Molecular Weight	20.03 kDA(-cTP )
PI	5.13(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data