PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G41380.1   CCT motif family protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G63820.1 11Arabidopsis thaliana1E-7533550610 (0)_
AT1G04500.4 11Arabidopsis thaliana5E-236075860 (0)_
AT1G04500.1 11Arabidopsis thaliana5E-236075860 (0)_
Os01g61900.1 7Oryza sativa3E-2710955660 (0)C
Os05g38990.1 7Oryza sativa3E-2610356650 (0)C
Os03g04620.2 7Oryza sativa8E-237263810 (0)_
Zm00001eb148750_P001 agpv5Zea mays2E-2610058660 (0)_
GRMZM2G062218_P01 3.21Zea mays2E-2610058660 (0)_
v1_GRMZM2G062218_P01 4a53Zea mays2E-2610058660 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CCT(1)
TargetP: Chloroplast (Class 4 C0.716; M0.039; S0.094; _0.475)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 307 aa (-cTP 277)
Molecular Weight 35.08 kDA(-cTP 31.82)
PI 5.26(-cTP 5.60)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21515685(GreenCut2)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help