PPDB

 The Plant Proteome Database

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AT5G41370.1   DNA repair helicase XPB1-like protein
Lab Annot.
Mapman: 28.2 DNA.repair
Curated Location
TAIR curated location: nucleus & cytoplasm15610358
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G41360.1 11Arabidopsis thaliana076795970 (0)_
AT5G41360.2 11Arabidopsis thaliana076593960 (0)_
Os01g49680.1 7Oryza sativa076782890 (0)_
Zm00001eb156220_P001 agpv5Zea mays072185910 (0)_
GRMZM2G055807_P02 3.21Zea mays072185910 (0)_
v1_GRMZM2G055807_P02 4a53Zea mays072185910 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: ERCC3_RAD25_C(1) Helicase_C(1) Helicase_C_3(1) ResIII(1) SNF2_N(2) SWI2_SNF2(1)
TargetP: Cytoplasm (Class 1 C0.108; M0.120; S0.099; _0.924)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 767 aa (-cTP 757)
Molecular Weight 87.06 kDA(-cTP )
PI 8.33(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help