PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G41340.1   ubiquitin conjugating enzyme 4

Lab Annot. ubiquitin conjugating enzyme 4
Mapman: 29.5.11.3 protein.degradation.ubiquitin.E2
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G63800.1 11Arabidopsis thaliana1E-11918787940 (0)_
AT1G63800.2 11Arabidopsis thaliana8E-10917287930 (0)_
AT5G41340.2 11Arabidopsis thaliana1E-10414699990 (0)_
Os10g31000.1 7Oryza sativa2E-102187788520 (20)_
Os10g31000.2 7Oryza sativa3E-94140899620 (20)_
Os01g60410.1 7Oryza sativa1E-26119405718 (18)_
AC149818.2_FGP006 3.21Zea mays1E-10218778850 (0)_
Zm00001eb403000_P001 agpv5Zea mays1E-10218778850 (0)_
GRMZM2G053764_P02 3.21Zea mays2E-102187788416 (15)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CENP-B_dimeris(1) DNA_pol_phi(1) UQ_con(1)
TargetP: Cytoplasm (Class 2 C0.041; M0.160; S0.128; _0.858)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 187 aa (-cTP 170)
Molecular Weight 21.30 kDA(-cTP )
PI 4.23(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help