PPDB

PPDB	The Plant Proteome Database

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AT5G41340.1 ubiquitin conjugating enzyme 4

Lab Annot.

ubiquitin conjugating enzyme 4
Mapman: 29.5.11.3 protein.degradation.ubiquitin.E2

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G63800.1 11 Arabidopsis thaliana 1E-119 187 87 94 0 (0) _
AT1G63800.2 11 Arabidopsis thaliana 8E-109 172 87 93 0 (0) _
AT5G41340.2 11 Arabidopsis thaliana 1E-104 146 99 99 0 (0) _
Os10g31000.1 7 Oryza sativa 2E-102 187 78 85 20 (20) _
Os10g31000.2 7 Oryza sativa 3E-94 140 89 96 20 (20) _
Os01g60410.1 7 Oryza sativa 1E-26 119 40 57 18 (18) _
AC149818.2_FGP006 3.21 Zea mays 1E-102 187 78 85 0 (0) _
Zm00001eb403000_P001 agpv5 Zea mays 1E-102 187 78 85 0 (0) _
GRMZM2G053764_P02 3.21 Zea mays 2E-102 187 78 84 26 (15) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CENP-B_dimeris(1) DNA_pol_phi(1) UQ_con(1)
TargetP:	Cytoplasm (Class 2 C0.041; M0.160; S0.128; _0.858)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	187 aa (-cTP 170)
Molecular Weight	21.30 kDA(-cTP )
PI	4.23(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data