PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G41040.1 HXXXD-type acyl-transferase family protein

Lab Annot.

HXXXD-type acyl-transferase protein
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G41040.2 11 Arabidopsis thaliana 0 441 100 100 3 (3) _
AT5G63560.1 11 Arabidopsis thaliana 0 426 63 76 0 (0) _
AT3G48720.1 11 Arabidopsis thaliana 0 421 60 78 70 (10) _
Os11g31090.1 7 Oryza sativa 0 437 63 76 4 (4) _
Os01g70025.1 6 Oryza sativa 1E-165 431 56 70 0 (0) _
Os05g04930.1 7 Oryza sativa 2E-73 399 36 54 0 (0) M
Zm00001eb146710_P002 agpv5 Zea mays 0 422 63 78 0 (0) _
GRMZM2G034360_P01 3.21 Zea mays 0 465 59 74 7 (7) _
Zm00001eb366700_P001 agpv5 Zea mays 0 465 59 74 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Transferase(1)
TargetP:	Cytoplasm (Class 2 C0.163; M0.065; S0.084; _0.903)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	457 aa (-cTP 443)
Molecular Weight	50.96 kDA(-cTP )
PI	5.60(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2250	Detail								seedlings [A. thaliana]	total tissue	atg5
2253	Detail								seedlings [A. thaliana]	total tissue	atg5
2269	Detail								seedlings [A. thaliana]	total tissue	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to roots)
21173025(root proteome)

Comparative Proteomics Data