PPDB

PPDB	The Plant Proteome Database

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AT5G41000.1 YELLOW STRIPE like 4

Lab Annot.

Mapman: 34.13 transport.peptides and oligopeptides

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G41000.2 11 Arabidopsis thaliana 0 670 96 96 0 (0) _
AT3G27020.1 11 Arabidopsis thaliana 0 673 84 92 4 (4) _
AT5G41000.3 11 Arabidopsis thaliana 0 494 100 100 0 (0) _
Os04g32050.1 7 Oryza sativa 0 645 73 88 0 (0) _
Os04g44320.1 7 Oryza sativa 0 642 59 74 0 (0) _
Os02g42220.1 7 Oryza sativa 0 644 58 75 2 (2) _
Zm00001eb085320_P001 agpv5 Zea mays 0 661 72 85 0 (0) _
Zm00001eb085320_P002 agpv5 Zea mays 0 661 72 85 0 (0) _
v1_GRMZM2G085833_P03 4a53 Zea mays 0 661 72 85 1 (1) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	OPT(1)
TargetP:	Cytoplasm (Class 1 C0.021; M0.064; S0.063; _0.968)
Predotar:
Subcel. Location:
TM-HMM prediction:	13 TMs
Aramemnon:	14 TMs
TAT position:
Length	670 aa (-cTP 663)
Molecular Weight	73.57 kDA(-cTP )
PI	8.24(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

17151019(vacuole - suspension cell)

Comparative Proteomics Data