PPDB

 The Plant Proteome Database

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AT5G40980.1   AT.I.24-6 protein%2C putative (DUF 3339)
Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
TAIR curated location: anchored to membrane12068095,12805588
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G27027.1 11Arabidopsis thaliana8E-406989970 (0)S
AT3G48660.1 11Arabidopsis thaliana6E-296671870 (0)S
AT5G63500.1 11Arabidopsis thaliana4E-286669860 (0)S
Os07g20290.1 7Oryza sativa1E-316771880 (0)S
Os01g69890.1 7Oryza sativa1E-316770910 (0)S
Os02g30550.1 7Oryza sativa3E-316869880 (0)S
Zm00001eb305550_P001 agpv5Zea mays7E-326870890 (0)S
GRMZM2G335407_P01 3.21Zea mays7E-326870890 (0)S
v1_GRMZM2G335407_P01 4a53Zea mays7E-326870890 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF3339(1) DUF999(2)
TargetP: Secreted (Class 1 C0.004; M0.038; S0.984; _0.071)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 1 TMs
TAT position:
Length 69 aa (-cTP 38)
Molecular Weight 7.61 kDA(-cTP )
PI 6.81(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help