PPDB

 The Plant Proteome Database

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AT5G40960.1   transmembrane protein%2C putative (DUF 3339)
Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
TAIR curated location: anchored to membrane12068095,12805588
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G08391.1 11Arabidopsis thaliana1E-136740620 (0)S
AT5G63500.1 11Arabidopsis thaliana2E-136844610 (0)S
AT3G48660.1 11Arabidopsis thaliana2E-126838610 (0)S
Os01g01180.1 7Oryza sativa5E-146747650 (0)S
Os05g01290.1 7Oryza sativa9E-146643650 (0)S
Os02g30470.1 7Oryza sativa3E-136841600 (0)S
Zm00001eb282270_P001 agpv5Zea mays8E-166756710 (0)S
GRMZM2G312933_P01 3.21Zea mays8E-166756710 (0)S
v1_GRMZM2G312933_P01 4a53Zea mays8E-166756710 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF3339(1) FAM176(1)
TargetP: Secreted (Class 2 C0.021; M0.024; S0.918; _0.243)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 2 TMs
TAT position:
Length 68 aa (-cTP 27)
Molecular Weight 7.48 kDA(-cTP )
PI 6.81(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help