PPDB

The Plant Proteome Database

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AT5G40890.1   chloride channel A

Lab Annot. ATCLC-A (CHLORIDE CHANNEL A); anion channel/ voltage-gated chloride channel
Mapman: 34.18 transport.unspecified anions
Curated Location
TAIR curated location: intracellular8969232
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G27170.1 11Arabidopsis thaliana078187920 (0)_
AT5G40890.2 11Arabidopsis thaliana06431001002 (2)S
AT5G33280.1 11Arabidopsis thaliana075754710 (0)_
Os12g25200.1 7Oryza sativa062469820 (0)_
Os04g36560.2 6Oryza sativa075355720 (0)_
Os04g36560.1 6Oryza sativa075355720 (0)_
Zm00001eb389440_P001 agpv5Zea mays077667800 (0)_
GRMZM2G057616_P01 3.21Zea mays077667807 (7)_
v1_GRMZM2G057616_P01 4a53Zea mays077667804 (4)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CBS(2) Voltage_CLC(2)
TargetP: Cytoplasm (Class 1 C0.117; M0.074; S0.116; _0.937)
Predotar:
Subcel. Location:
TM-HMM prediction: 11 TMs
Aramemnon: 11 TMs
TAT position:
Length 775 aa (-cTP 765)
Molecular Weight 85.41 kDA(-cTP )
PI 6.81(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
1442Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

19376835(leaf phosphoproteins)
18686298(tonoplast - phosphoproteome (leaves))
20166762(guard cells (Arabidopsis))
19114538(guard cells Arabidopsis leaf)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help