PPDB

PPDB	The Plant Proteome Database

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AT5G40870.1 uridine kinase/uracil phosphoribosyltransferase 1

Lab Annot.

uridine kinase-like 1 (UKL1)
Mapman: 23.3.2.2 nucleotide metabolism.salvage.nucleoside kinases.uridine kinase

Curated Location

plastid (Pubmed: 23198870 19563437 21828290 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G27190.1 11 Arabidopsis thaliana 0 483 89 93 0 (0) C
AT4G26510.1 11 Arabidopsis thaliana 0 480 74 85 18 (5) _
AT4G26510.2 11 Arabidopsis thaliana 0 480 74 85 18 (5) _
Os09g32820.1 7 Oryza sativa 0 500 75 84 9 (9) _
Os08g41790.1 7 Oryza sativa 0 491 77 84 2 (2) C
Os11g16370.1 7 Oryza sativa 0 477 68 82 0 (0) _
Zm00001eb210120_P002 agpv5 Zea mays 0 480 67 81 0 (0) _
v1_GRMZM2G169462_P01 4a53 Zea mays 0 480 67 81 8 (7) _
GRMZM2G169462_P01 3.21 Zea mays 0 480 67 81 23 (9) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_17(2) AAA_18(1) AAA_26(1) AAA_33(1) CoaE(2) Cytidylate_kin(2) Frankia_peptid
TargetP:	Chloroplast (Class 3 C0.848; M0.039; S0.004; _0.356)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	486 aa (-cTP 439)
Molecular Weight	54.43 kDA(-cTP 49.56)
PI	6.13(-cTP 6.25)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1766	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Met1-1
2287	Detail								[A. thaliana]		Clp C1 WT
2297	Detail								[A. thaliana]		Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

19376835(leaf phosphoproteins)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data