PPDB

The Plant Proteome Database

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AT5G40710.1   zinc finger (C2H2 type) family protein

Lab Annot.
Mapman: 27.3.11 RNA.regulation of transcription.C2H2 zinc finger family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G40710.2 11Arabidopsis thaliana7E-1471961001000 (0)S
AT5G63280.1 11Arabidopsis thaliana2E-9925256750 (0)S
Os12g13130.4 7Oryza sativa3E-9922459790 (0)M
Os12g13130.3 7Oryza sativa3E-9922459790 (0)M
Os12g13130.2 7Oryza sativa3E-9922459790 (0)M
GRMZM2G095323_P03 3.21Zea mays4E-10425156770 (0)S
Zm00001eb411670_P004 agpv5Zea mays4E-10425156770 (0)S
v1_GRMZM2G095323_P03 4a53Zea mays4E-10425156770 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Actin_micro(1) E3_UbLigase_RBR(2)
TargetP: Secreted (Class 2 C0.024; M0.119; S0.870; _0.063)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 1 TMs
TAT position:
Length 272 aa (-cTP 257)
Molecular Weight 31.89 kDA(-cTP )
PI 9.36(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help