PPDB

The Plant Proteome Database

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AT5G40670.1   PQ-loop repeat family protein / transmembrane family protein

Lab Annot. PQ-loop repeat transmembrane protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os12g18110.1 7Oryza sativa3E-13026864790 (0)S
Os12g18110.2 7Oryza sativa9E-12927063800 (0)S
Os12g18110.3 7Oryza sativa2E-12827163800 (0)S
GRMZM2G015869_P01 3.21Zea mays6E-13026764792 (2)S
Zm00001eb408630_P002 agpv5Zea mays6E-13026764790 (0)S
v1_GRMZM2G015869_P01 4a53Zea mays6E-13026764791 (1)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF2207(1) PQ-loop(4)
TargetP: Secreted (Class 4 C0.053; M0.010; S0.692; _0.310)
Predotar:
Subcel. Location:
TM-HMM prediction: 7 TMs
Aramemnon: 6 TMs
TAT position:
Length 270 aa (-cTP 220)
Molecular Weight 31.03 kDA(-cTP )
PI 7.00(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1744Detail        [A. thaliana] Mep-6

* For details about the exprimental sources click here.

Published Proteomics Data

17151019(vacuole - suspension cell)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help