PPDB

PPDB	The Plant Proteome Database

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AT5G40650.1 succinate dehydrogenase 2-2

Lab Annot.

SDH2-2 (succinate dehydrogenase 2-2)
Mapman: 8.1.7 TCA / org.transformation.TCA.succinate dehydrogenase

Curated Location

mitochondria (Pubmed: 11442063 28039307 )

TAIR curated location: mitochondrion14671022,11442063

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G27380.1 11 Arabidopsis thaliana 0 279 92 97 10 (10) M
AT3G27380.2 11 Arabidopsis thaliana 0 279 92 97 10 (10) M
AT5G40650.2 11 Arabidopsis thaliana 6E-168 224 100 100 0 (0) M
Os08g02640.5 7 Oryza sativa 3E-139 234 80 88 10 (10) M
Os08g02640.4 7 Oryza sativa 3E-139 234 80 88 10 (10) M
Os08g02640.3 7 Oryza sativa 3E-139 234 80 88 10 (10) M
GRMZM2G134134_P01 3.21 Zea mays 6E-144 280 71 80 11 (11) M
v1_GRMZM2G134134_P01 4a53 Zea mays 6E-144 280 71 80 9 (8) M
Zm00001eb261270_P001 agpv5 Zea mays 6E-144 280 71 80 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Fer2(2) Fer2_3(1) Fer4_10(2) Fer4_17(1) Fer4_18(3) Fer4_7(2) Fer4_8(2)
TargetP:	Mitochondria (Class 2 C0.170; M0.803; S0.019; _0.040)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	280 aa (-cTP 242)
Molecular Weight	31.14 kDA(-cTP )
PI	8.93(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
528	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt2)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1612	Detail								Natural Senescence leaf [A. thaliana]	chloroplast fractionation thylakoid membrane
2269	Detail								seedlings [A. thaliana]	total tissue	wild-type
2271	Detail								seedlings [A. thaliana]	total tissue	wild-type
2273	Detail								seedlings [A. thaliana]	total tissue	wild-type
2320	Detail								[A. thaliana]	Thylakoids plastoglobule

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
18814325(cotyledons)
19200160(flower-stage 12)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
20018591(Zn2+ binding (mitochondria - cell culture))
19114538(guard cells Arabidopsis leaf)
21311031(mitochondria)
21841088(mitochondria (2DE native gel))
21173025(root proteome)
21472856(mitochondria-LC-MS/MS-uncurated)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data