PPDB

PPDB	The Plant Proteome Database

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AT5G40630.1 Ubiquitin-like superfamily protein

Lab Annot.

Ubiquitin-like protein
Mapman: 29.5.11.1 protein.degradation.ubiquitin.ubiquitin

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G14360.1 11 Arabidopsis thaliana 1E-46 162 53 70 0 (0) M
AT5G62100.6 11 Arabidopsis thaliana 2E-17 107 37 69 0 (0) _
AT5G62100.3 11 Arabidopsis thaliana 2E-17 107 37 69 1 (1) _
Os02g38410.1 7 Oryza sativa 1E-36 138 49 68 0 (0) M
Os01g67950.1 7 Oryza sativa 1E-33 120 47 69 0 (0) M
Os01g61500.1 7 Oryza sativa 9E-26 108 45 66 0 (0) _
v1_GRMZM2G132682_P01 4a53 Zea mays 6E-38 104 56 79 0 (0) M
GRMZM2G132682_P01 3.21 Zea mays 6E-38 104 56 79 0 (0) M
Zm00001eb183910_P002 agpv5 Zea mays 6E-38 104 56 79 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF3446(2) Macoilin(1) Rad60-SLD(1) SR-25(1) ubiquitin(1) Ubiquitin_2(1)
TargetP:	Chloroplast (Class 3 C0.859; M0.338; S0.005; _0.009)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	165 aa (-cTP 83)
Molecular Weight	18.11 kDA(-cTP 9.40)
PI	8.82(-cTP 5.53)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data