PPDB

The Plant Proteome Database

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AT5G40470.1   RNI-like superfamily protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G15475.1 11Arabidopsis thaliana3E-1739226440 (0)_
AT5G23340.1 11Arabidopsis thaliana1E-0930927480 (0)_
AT1G77000.1 11Arabidopsis thaliana3E-0720229490 (0)_
ChrSy.fgenesh.mRNA.74 7Oryza sativa7E-7451335530 (0) 
Os11g42160.1 7Oryza sativa1E-1337525410 (0)_
Os11g01780.1 7Oryza sativa2E-0731826430 (0)_
Zm00001eb246170_P001 agpv5Zea mays9E-6450433540 (0)_
v1_AC195347.4_FGP004 4a53Zea mays9E-6450433540 (0)_
AC195347.4_FGP004 3.21Zea mays9E-6450433540 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: F-box-like(1) ISP3_C(1) LRR_1(4) LRR_4(5) LRR_6(5)
TargetP: Chloroplast (Class 2 C0.944; M0.012; S0.003; _0.181)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 496 aa (-cTP 447)
Molecular Weight 55.04 kDA(-cTP 49.47)
PI 5.65(-cTP 5.74)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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