PPDB

The Plant Proteome Database

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AT5G40410.1   Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot. Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G11290.1 11Arabidopsis thaliana1E-14457939591 (1)C
AT3G24000.1 11Arabidopsis thaliana1E-14357739580 (0)M
AT1G08070.2 11Arabidopsis thaliana7E-14255539600 (0)S
Os09g15800.1 7Oryza sativa2E-14453740610 (0)M
Os03g27880.1 7Oryza sativa1E-14354639620 (0)M
Os12g06070.1 7Oryza sativa4E-14353739610 (0)M
Zm00001eb309960_P001 agpv5Zea mays3E-14256639590 (0)M
Zm00001eb309960_P005 agpv5Zea mays3E-14256639590 (0)M
Zm00001eb309960_P004 agpv5Zea mays3E-14256639590 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DYW_deaminase(1) PPR(10) PPR_1(9) PPR_2(9) PPR_3(5) PPR_long(3) TPR_14(1)
TargetP: Mitochondria (Class 2 C0.039; M0.746; S0.063; _0.023)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 608 aa (-cTP 570)
Molecular Weight 68.67 kDA(-cTP )
PI 8.72(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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