PPDB

PPDB	The Plant Proteome Database

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AT5G40400.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G40400.2 11 Arabidopsis thaliana 0 610 100 100 0 (0) M
AT5G55840.3 11 Arabidopsis thaliana 2E-65 506 30 50 0 (0) _
AT5G55840.1 11 Arabidopsis thaliana 2E-65 506 30 50 0 (0) M
Os01g36610.1 7 Oryza sativa 4E-123 580 38 57 0 (0) M
Os07g20510.1 7 Oryza sativa 4E-52 482 28 43 0 (0) M
Os03g10420.1 7 Oryza sativa 2E-49 495 27 44 0 (0) _
GRMZM2G167422_P01 3.21 Zea mays 1E-110 586 36 57 0 (0) _
v1_GRMZM2G167422_P01 4a53 Zea mays 1E-110 586 36 57 0 (0) _
Zm00001eb342200_P001 agpv5 Zea mays 1E-110 586 36 57 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	BTAD(2) DUF1884(4) ECSIT(5) MRP-S27(3) PPR(13) PPR_1(12) PPR_2(11) PPR_3(7) PPR_
TargetP:	Chloroplast (Class 5 C0.322; M0.244; S0.089; _0.035)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	610 aa (-cTP 589)
Molecular Weight	70.19 kDA(-cTP 67.77)
PI	6.83(-cTP 6.34)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data