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AT5G40390.1
Raffinose synthase family protein
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| Lab Annot. |
galactinol-sucrose galactosyltransferase/ hydrolase SIP1 (SEED IMBIBITION 1-LIKE);
Mapman: 3.1.2.1 minor CHO metabolism.raffinose family.raffinose synthases.known |
| Curated Location |
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| Species |
Arabidopsis thaliana
Source:
TAIR Arabidopsis (v.11) |
| Links |
TAIR PeptideAtlas POGS SUBA Uniprot PTM
Get sequence
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Related Genes
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#Spots: The number of publicly accessible spots are in parenthesis
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| Prediction |
| PFAM: |
Raffinose_syn(1) |
| TargetP: |
Cytoplasm (Class 2 C0.182; M0.056; S0.127; _0.881) |
| Predotar: |
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| Subcel. Location: |
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| TM-HMM prediction: |
No |
| Aramemnon: |
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| TAT position: |
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| Length |
783 aa (-cTP 779) |
| Molecular Weight |
86.24 kDA(-cTP ) |
| PI |
4.91(-cTP ) |
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Experimental Evidence
Expand
View Identified Peptides
View GeneModel
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| Expr* | Spot | MW native | MW denatured | pI native | pI denatured | Type | Mowse | Ambiguity | Tissue | Sample from | Genotype |
| 339 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type |
| 371 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | clpr4-1 |
| 451 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | clpr4-1 |
| 528 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (wt2) |
| 874 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type |
| 1392 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (rep. 1) |
| 1395 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (rep. 1) |
| 1396 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | clpt1xclpt2 (rep. 2) |
| 1400 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 -rep. 1 | wild-type |
| 1403 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 -rep. 1 | clpp3-1 |
| 1417 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | clpr4-1 (rep. 2) |
| 1418 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | clpr4-1 (rep. 3) |
| 1431 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | wild-type (rep. 2) |
| 1494 | Detail | | | | | | | | leaf [A. thaliana] | | |
| 2009 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type |
* For details about the exprimental sources
click here.
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Published Proteomics Data
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18463617(suspension cells-phosphorylated proteins)
18431481(chloroplast)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19525416(leaf (wt and clpr4-1 mutant))
19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)
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Comparative Proteomics Data
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