PPDB

The Plant Proteome Database

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AT5G40360.1   myb domain protein 115

Lab Annot.
Mapman: 27.3.25 RNA.regulation of transcription.MYB domain transcription factor family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G27785.1 11Arabidopsis thaliana7E-7937643550 (0)_
AT4G18770.1 11Arabidopsis thaliana3E-5114459741 (1)_
AT2G25230.1 11Arabidopsis thaliana1E-4923446580 (0)_
Os06g06740.1 7Oryza sativa1E-4613659750 (0)M
Os12g07610.1 7Oryza sativa6E-4414557710 (0)_
Os07g12130.1 7Oryza sativa3E-4312958730 (0)_
Zm00001eb060980_P001 agpv5Zea mays1E-4716054700 (0)_
GRMZM5G870592_P01 3.21Zea mays1E-4616054700 (0)M
v1_GRMZM2G443052_P01 4a53Zea mays2E-4416951660 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Myb_DNA-bind_6(2) Myb_DNA-bind_7(2) Myb_DNA-binding(2) Phage_lysozyme2(1) Rap1_C
TargetP: Cytoplasm (Class 4 C0.323; M0.107; S0.089; _0.721)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 359 aa (-cTP 327)
Molecular Weight 41.60 kDA(-cTP )
PI 6.17(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help