PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G40330.1   myb domain protein 23

Lab Annot.
Mapman: 27.3.25 RNA.regulation of transcription.MYB domain transcription factor family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G27920.1 11Arabidopsis thaliana3E-8922764740 (0)_
AT5G14750.1 11Arabidopsis thaliana6E-8321560700 (0)_
AT5G14750.3 11Arabidopsis thaliana2E-5418652630 (0)M
Os05g35500.1 7Oryza sativa8E-4910366820 (0)_
Os08g43550.1 7Oryza sativa5E-4810965790 (0)_
Os01g65370.1 7Oryza sativa1E-4710364820 (0)_
GRMZM2G102790_P01 3.21Zea mays1E-4910965770 (0)_
v1_GRMZM2G102790_P01 4a53Zea mays1E-4910965770 (0)_
Zm00001eb268770_P001 agpv5Zea mays3E-4910965770 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF2236(1) Myb_DNA-bind_6(2) Myb_DNA-binding(2) Rap1_C(2) SLIDE(2)
TargetP: Cytoplasm (Class 1 C0.048; M0.108; S0.052; _0.958)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 219 aa (-cTP 163)
Molecular Weight 24.94 kDA(-cTP )
PI 9.11(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help