PPDB

PPDB	The Plant Proteome Database

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AT5G40160.1 Ankyrin repeat family protein

Lab Annot.

Sorting TAT substrate Thylakoid 1 (STT1) (EMBO506)
Mapman: 29.3.3 protein.targeting.chloroplast

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G40160.2 11 Arabidopsis thaliana 0 282 100 100 0 (0) C
AT5G66055.1 11 Arabidopsis thaliana 7E-52 206 44 63 0 (0) C
AT5G66055.2 11 Arabidopsis thaliana 5E-28 146 41 60 0 (0) C
Os06g13000.1 7 Oryza sativa 2E-93 182 71 86 0 (0) M
Os03g04300.2 7 Oryza sativa 3E-52 186 46 68 0 (0) C
Os03g04300.1 7 Oryza sativa 3E-52 186 46 68 0 (0) C
Zm00001eb208780_P004 agpv5 Zea mays 3E-106 243 61 76 0 (0) C
GRMZM2G019838_P02 3.21 Zea mays 3E-106 243 61 76 24 (23) C
v1_GRMZM2G019838_P01 4a53 Zea mays 3E-106 243 61 76 13 (13) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Ank(4) Ank_2(4) Ank_3(4) Ank_4(4) Ank_5(3) PhdYeFM_antitox(1)
TargetP:	Chloroplast (Class 1 C0.931; M0.064; S0.020; _0.040)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	315 aa (-cTP 276)
Molecular Weight	35.46 kDA(-cTP 31.24)
PI	5.09(-cTP 4.90)

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1178	Detail								leaf [A. thaliana]	co-IP RH3 stroma	clpr2-1

* For details about the exprimental sources click here.

Published Proteomics Data

19995723(chloroplast reference proteome)

Comparative Proteomics Data