PPDB

The Plant Proteome Database

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AT5G40140.1   RING/U-box superfamily protein with ARM repeat domain-containing protein

Lab Annot. RING/U-box protein with ARM repeat domain
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G65200.1 11Arabidopsis thaliana3E-14752647650 (0)M
AT3G47820.1 11Arabidopsis thaliana2E-11252043601 (0)M
AT5G62560.1 11Arabidopsis thaliana3E-9333250650 (0)M
Os09g21740.1 7Oryza sativa3E-6251535530 (0)M
Os06g13090.1 7Oryza sativa1E-5341733520 (0)_
Os06g13080.1 7Oryza sativa2E-5329940570 (0)C
GRMZM2G100090_P01 3.21Zea mays2E-7052835540 (0)M
v1_GRMZM2G100090_P01 4a53Zea mays2E-7052835540 (0)M
Zm00001eb311800_P001 agpv5Zea mays2E-7052835540 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Arm(5) ICAT(1) KAP(2) U-box(1) zf-RING_UBOX(1)
TargetP: Chloroplast (Class 2 C0.865; M0.154; S0.002; _0.122)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 550 aa (-cTP 509) (-lTP 414)
Molecular Weight 60.22 kDA(-cTP 55.43)(-lTP 45.41)
PI 8.67(-cTP 8.14)(-lTP 8.084)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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