PPDB

The Plant Proteome Database

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AT5G40050.1   F-box/FBD-like domains containing protein

Lab Annot. F-box protein
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G25860.1 11Arabidopsis thaliana1E-7146838550 (0)_
AT3G60040.5 11Arabidopsis thaliana1E-5045635520 (0)_
AT3G60040.2 11Arabidopsis thaliana1E-5045635520 (0)_
Os10g03850.2 7Oryza sativa2E-0823826460 (0)_
Os10g03850.3 7Oryza sativa2E-0823826460 (0)_
Os10g03850.1 7Oryza sativa3E-0823826460 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: F-box(1) F-box-like(1) FBD(3) Mannosyl_trans(1)
TargetP: Chloroplast (Class 4 C0.741; M0.049; S0.036; _0.385)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 415 aa (-cTP 380)
Molecular Weight 47.92 kDA(-cTP 44.08)
PI 4.94(-cTP 4.87)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1448Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)

Comparative Proteomics Data


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