PPDB

The Plant Proteome Database

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AT5G40040.1   60S acidic ribosomal protein family

Lab Annot. 60S acidic ribosomal protein family
Mapman: 29.2.1.2.2.82 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P2
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G28500.1 11Arabidopsis thaliana2E-4011573811 (1)_
AT2G27710.4 11Arabidopsis thaliana2E-1970577564 (61)S
AT3G44590.1 11Arabidopsis thaliana6E-1870527221 (18)S
Os01g09510.1 7Oryza sativa1E-1867527332 (32)S
Os02g32760.1 7Oryza sativa2E-18114516824 (24)_
Os01g09510.4 7Oryza sativa5E-1867527315 (15)S
v1_GRMZM2G114954_P01 4a53Zea mays4E-2372558164 (63)S
Zm00001eb348240_P004 agpv5Zea mays4E-237255810 (0)S
Zm00001eb348240_P001 agpv5Zea mays4E-237255810 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: NPR1_interact(1) Ribosomal_60s(1)
TargetP: Cytoplasm (Class 5 C0.106; M0.138; S0.331; _0.385)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 114 aa (-cTP 110)
Molecular Weight 11.76 kDA(-cTP )
PI 4.52(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help